This is a great recipe for bakery-style lemon muffins with a nice dose of crunchy poppy seeds that will rise tall and crack slightly at the top as they bake to a golden brown. A cold syrup is brushed the minute they get out of the oven and topped with a sweet lemon glaze when they cool down for even more flavor!

About this recipe
So moist and irresistible that you'll want to make them often.
I set out to make a bakery-style muffin and a very lemony muffin, all in one.
The challenge in making them was adding as much lemon flavor as possible to each bite. Otherwise, they're just another muffin with seeds.
So far, they're the best lemon poppyseed muffins I ever made.
How to add extra lemon flavor
- Lemon sugar: it's a simple technique to bring more flavor out of fresh lemon zest (it works with other citrus), and that is to rub it with the sugar before adding it to the batter. This releases the oil in the skin.
- Lemon syrup: brushing the muffins with cold syrup and then adding a lemon powdered sugar glaze, adds a lot of fresh lemon flavor.
We're making crunchy lemon muffins after all.
Ingredients
- Lemons: fresh lemon juice and zest gives the muffin batter the best flavor.
- Poppy seeds: they add crunchiness and pair great with lemon. Poppy seeds made for baking are processed and apt for eating.
- Greek yogurt: it's a great ingredient that renders tender muffins and a tanginess perfect to balance out the sugar in the recipe.
- Butter: use your favorite unsalted butter.
- Sugar: use white, granulated sugar. Light brown sugar can also be used, or a mix of both, half of each.
- Eggs: fresh, large.
- Vanilla: I use pure vanilla extract or pure vanilla paste when available, but a good vanilla essence (artificially flavored) also works and is infinitely cheaper.
- Flour: all-purpose flour and cake flour work.
- Salt: I like to use kosher salt when baking. But regular table salt works just fine.
- Baking powder and baking soda: both act as leavening agents for these lemon poppyseed muffins, so make sure they're not expired.
Lemon poppy seed muffins batter
It's a vintage muffin recipe made the old-fashioned way. You don't need special equipment, just two bowls, a whisk (or wooden spoon), and a spatula. Super simple.
- Dry ingredients: these include the poppy seeds and lemon zest that is rubbed with the sugar first to extract more lemon flavor (images 1 and 2 below). Use a large bowl for this part because this is where you'll be mixing the final batter.
- Wet ingredients: they are mixed in a medium bowl and a certain order: first, lightly mix the eggs, then add the yogurt and lemon juice, and last, the melted butter. (images 3 and 4).
- Quick mixing: the wet ingredients are added to the dry mixture (image 5), and you should integrate well but never beat or overmix. When there are no dry spots, stop mixing. Make sure there is no flour mixture in the bottom of the bowl, something that can happen when the batter is dense, as this one. I use a spatula for this step (image 6).
Muffin pan
Or muffin tin, as it's also called. They come in different shapes and sizes, and you should buy paper liners that fit well. So always check the measurements of both.
How to get even muffins: depending on who will eat them (maybe you're taking them to a barbecue or a bake sale), you'll want them to eat a perfect lemon poppy seed muffin, right? For me, they're mostly an afternoon snack at home, but still. Either way, we do want them to bake at the same time, and for that, the key is to divide the batter evenly among tins or muffin liners. The easiest way to do this is probably with a cookie or ice cream scoop, so you measure the same amount each time. You can also weigh the batter and know how much goes into each muffin cup.
Lemon syrup
We all want moist muffins, don't we? Even though the word sometimes makes us cringe, I believe good muffins should be soft and fluffy, which implies not being dry. Adding a simple syrup is one of the best ways to add extra flavor and moistness to a muffin. In this case, the liquid is lemon, of course, because lemony muffins are our number one goal.
Brushing the muffin tops: right after you take them out of the oven, while still hot so they absorb as much syrup as they can. I use a brush because it's the simplest way to get most of the syrup into the muffin and spill as little as possible. Though some will drip down anyways, it's a fact.
Lemon glaze
A powdered sugar glaze is a perfect way to dress up these muffins. It adds sweetness, more lemon flavor, and seals in moisture. Every bite is luscious!
How to make it: mix powdered sugar with lemon juice. How much juice is always the question, and depends on how thick you want the glaze to be. Less juice for a whiter, thicker topping, and more juice for a more tart lemon glaze that will be runnier and add a thinner layer of icing.
Kitchen notes
- Organization: always read the recipe first and make sure you have all the ingredients at the right temperatures, and also the rest of the equipment and space to make it. This will make the process so much easier!
- Wet ingredients: it's important to add the melted butter slightly warm and at the end, after you've mixed the eggs with the greek yogurt. This will ensure that the butter doesn't seize or cook bits of egg (that can happen if you add it too hot).
- Syrup: it adds moisture and flavor, so don't omit it! The way it will seep right into the muffins is by adding cold lemon syrup to the hot muffins. But, if for some reason you don't add it and they cool down, heat the syrup before adding it.
- Yogurt: I love the tanginess of Greek yogurt (plain, unsweetened), but you can also use sour cream with great results. I have made it with both.
- Amount of seeds: this recipe calls for two tablespoons, and you can add up to 3 if you want them overflowing with them. Some people like it that way though it makes the muffins a bit denser.
- Tart lemon flavor: some like a sweeter muffin with a nice lemon flavor, and others like to almost pucker. While muffins are not meant to make you pucker, you can add much more flavor by using more lemon zest, as much as double the amount in the recipe.
- Muffin tins: I use regular-sized ones, a very old pan I love. You can butter or spray each one or use muffin cups (also called muffin liners, cupcake liners, or paper cups). There's minimal cleanup of the pan, and they're easier to transport and store.
- Storing them: I fervently believe muffins are meant to be eaten in the first few hours they're made. But they last a day or two if covered with plastic wrap, in a bag or airtight container. Freezing them is the best option for me when not eating them immediately and before adding the glaze. Defrost them at room temperature and warm them slightly in a medium oven (350°F/180°C) before eating.
Frequently asked questions
With this recipe! Follow the instructions in the recipe card below, and you can have fresh, homemade muffins that can also be frozen. Defrost at room temperature and warm lightly before eating.
Don't beat; mix the batter well with a whisk. That's why an electric mixer is discouraged, so the ingredients are integrated well but not beaten.
By adding lemon syrup while they're still hot and not overbaking them. It's important to take them out of the oven as soon as a tester comes out clean.
Overbaking and overbeating the batter are the most common causes in my experience. When baking, it's important to know your oven and check that the temperature is correct. You can buy oven thermometers for that. Overmixing the batter results in a less fluffy crumb and usually a drier one.
Related recipes you might like:
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Lemon Poppy Seed Muffins
This is a great recipe for bakery-style lemon muffins with a nice dose of crunchy poppy seeds, that will rise tall and crack slightly at the top as they bake to a golden brown. A cold syrup is brushed the minute they get out of the oven and topped with a sweet lemon glaze when they cool down for even more flavor!
- Total Time: 1 hour 35 minutes
- Yield: 12 medium muffins
Ingredients
For the muffins:
- ⅔ cup granulated sugar
- 1 tablespoon lemon zest (about 2 lemons)
- 2 cups all-purpose flour
- 2 ½ teaspoons baking powder
- ¼ teaspoon baking soda
- ¼ teaspoon salt
- ¾ cup Greek yogurt, at room temperature
- 1 teaspoon lemon juice
- 2 eggs, at room temperature
- ¼ teaspoon vanilla extract
- ½ cup unsalted butter, melted and just warm
- 2 tablespoons poppy seeds
For the cold syrup:
- ¼ cup lemon juice (use the ones you zested)
- 3 tablespoons granulated sugar
Lemon glaze:
- ¾ cup powdered sugar
- 1-2 tablespoons of fresh lemon juice
Instructions
For the muffins:
- Turn on the oven at 350°F/180ºC.
- Butter or spray 12 muffin tins, or fill with paper liners (also called muffin liners or paper cups).
- Mix sugar with the grated zest in a large bowl, rubbing it with the tips of your fingers until the oil in the lemon zest starts to impregnate the sugar.
- Add flour, baking powder, baking soda, salt, and the poppy seeds.
- Mix eggs lightly in a medium bowl.
- Add yogurt, lemon juice, vanilla and mix well.
- Add the warm melted butter until smooth without beating, only whisking or mixing.
- Make a well in the middle of the dry ingredients and dd the wet ones.
- Mix with a spatula only until it is moistened, there may be a trace of flour. Do not beat or over mix much but make sure there are no large spots of flour in the bottom of the bowl.
- Divide evenly between the muffin tins. Use a cookie or ice cream scoop or a spoon.
- Bake for about 20 minutes, or until a tester comes out dry. Don't be tempted to over bake them so they don't dry out.
For the ccold syrup:
- Mix lemon juice with sugar just before taking the muffins out.
- Brush this syrup over the hot muffins just out of the oven.
- Let it soak and cool completely on a metal rack. If using paper liners remove the muffins from the pan onto the cooling rack. If not using liners, make sure to take the muffins out of the pan as soon as you can handle them cut carefully, so the syrup doesn't make them stick. Cool completely.
For the glaze:
- Put powdered sugar in a bowl.
- Add half the lemon juice and mix until smooth.
- Keep adding a little more juice until you have the consistency you desire.
- Top the muffins with the lemon glaze and let dry before eating.
Notes
Organization: always read the recipe first and make sure you have all the ingredients, at the right temperatures, and also the rest of the equipment and space to make it. This will make the process so much easier!
Baking time: keep in mind that all ovens and pans are different, even if they look the same or very similar. The baking time in my recipes are as accurate as I they can be, but keep in mind that it might take more or sometimes less. You can buy an oven thermometer online to check that your oven is the right temperature. I recommend you keep track of how our oven works and what tiny details you might need to adjust.
Wet ingredients: it's important to add the melted butter slightly warm and at the end, after you've mixed the eggs with the greek yogurt. This will ensure that the butter doesn't seize or cook bits of egg (that can happen if you add it too hot).
Sugar: use white, granulated sugar. Light brown sugar can also be used, and also half of each.
Vanilla: use pure vanilla extract or paste if you can. The amount is a small one so not to overpower the lemon, but enough to mellow the flavor in a good way.
Baking powder and baking soda: both act as leavening agents for these lemon poppyseed muffins, and you can get away with using only baking powder but I don't recommend using only baking soda.
Syrup: it add moisture and flavor, so don't omit it! The way it will seep right into the muffins is adding a cold lemon syrup to the hot muffins. But, if for some reason you don't add it and they cool down, heat the syrup before adding it.
Yogurt: I love the tanginess of Greek yogurt (plain, unsweetened) but you can also use sour cream with great results. I have made it with both.
Amount of seeds: this recipe calls for two tablespoons and you can add up to 3 if you want them overflowing with them. I know some people like it that way though it makes the muffins a bit denser.
Tart lemon flavor: some like a sweeter muffin with a nice lemon flavor, and other like to almost pucker. While muffins are not meant to make you pucker, you can add much more flavor by using more lemon zest, as much as double the amount in the recipe.
Muffin tins: I use regular sized ones, a very old pan I love. You can butter or spray each one or you can use muffin cups (also called muffin liners, cupcake liners or paper cups). There's minimal clean up of the pan and they're easier to transport and store.
Storing them: I fervently believe muffins are meant to be eaten in the first few hours they're made. But they do last a day or two if kept covered with plastic wrap, in a bag or airtight container. Freezing them is the best option for me when not eating them immediately and before adding the glaze. Defrost them at room temperature and warm slightly in a medium oven (350°F/180°C) before eating.
- Prep Time: 15 minutes
- Cooling time: 60 minutes
- Cook Time: 20 minutes
- Category: Muffins
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1/12
- Calories: 269
- Sugar: 22.6 g
- Sodium: 96.8 mg
- Fat: 10.2 g
- Carbohydrates: 40.4 g
- Protein: 5.2 g
- Cholesterol: 53.7 mg
Keywords: lemon poppy seed muffins
angiesrecipes says
I love just how tender and smooth the crumb looks and the poppy seeds are evenly distributed...they are perfect, Paula.